2 ingredient protein bagel

5 Ingredient Easy High Protein Bagels Recipe (with Greek Yogurt)

This past weekend, I made a 5 ingredient protein bagel recipe and it turned out so good and I need to share this recipe with you!

If you’re craving fluffy bagels with higher protein content but want a quicker, easier, and healthier alternative to traditional bagels, this high protein bagel recipe is your answer. These homemade bagels require just a few simple main ingredients: Greek yogurtflour, and baking powder, plus a few extras like an egg wash and your choice of bagel seasoning. You’ll have delicious, soft, and golden brown bagels ready in no time to satisfy your bagel cravings.

With about 15 g protein per serving, this recipe is an easy way to boost how much protein you eat per day while still being easy and quick. 

homemade protein bagels

One of my biggest health goals this year is to prioritize reaching my daily protein goal and go back to strength training at least 3 times per week. Which is why I’m so excited to share with you this super simple 5 ingredient dough recipe that is so versatile and does not require much cooking time.

Whether you’re making these easy bagels for a breakfast sandwich, topping them with cream cheese, or experimenting with different flavors, these bagels are perfect for anyone trying to meet their protein goals without sacrificing taste. Plus, they’re a great alternative to store-bought bagels or even cottage cheese bagels, offering a lighter yet protein-packed option!

Jump to Recipe

Why You’ll Love This Homemade Protein Bagel Recipe

  • Quick and Easy: With just a few simple ingredients, these homemade bagels are ready in under 30 minutes.
  • High Protein Content: Using Greek yogurt boosts the protein, and you can add unflavored protein powder for extra protein to fit your dietary needs or you can sub with cottage cheese instead of Greek yogurt.
  • Customizable Toppings: Sprinkle sesame seedspoppy seeds, or even kosher salt for classic flavors, or go sweet with a touch of brown sugar or chocolate chips.
  • Healthier Alternative: These bagels have a higher protein content and fewer calories than a regular bagel, making them perfect for those with fitness or protein goals.
  • Great Texture: The combination of flourGreek yogurt, and baking powder creates soft, chewy, and fluffy bagels with the perfect bagel shape every time.

Why These Bagels Are Better Than Store-Bought

When you make your own bagels at home, you have full control over the ingredients. Unlike store-bought bagels, which often contain added sugars and other ingredients, these high-protein bagels are made with simple ingredients like Greek yogurt, self rising flour, and baking powder.

They pack extra protein, making them a better choice for those looking to hit their protein goals without sacrificing flavor.

Plus, you can customize the bagels with your favorite toppings, like sesame seeds or poppy seeds, for a truly homemade touch.

Bonus: They’re fluffy, golden brown, and far easier to make than you’d expect!

Ingredients for Protein Bagels

To make these high-protein bagels, you’ll need the following key ingredients:

  • All-purpose flour or Bread flour or Self-rising flour. You can make your own self-rising flour by combining all-purpose flour with baking powder and kosher salt. For a healthier twist, try whole wheat flour or even gluten-free flour for gluten free bagels. I’ve tried regular flour (all purpose flour) and whole wheat flour and they both turned out great! 
  • Greek yogurt. Use full-fat Greek yogurt for richer texture, or you can use low fat Greek yogurt as well. If you want to get more grams of protein in, then definitely try to avoid plain yogurt since it is low in protein. 
  • Baking powder. The leavening agent that makes the bagel dough rise and keeps your bagels soft and fluffy. Omit if you are using self rising flour.
  • Salt. Just a little bit to enhance the flavor of the dough.
  • Egg wash. A large egg or egg whites brushed on top ensures a golden brown finish.
  • Bagel seasoning. Sprinkle sesame seedspoppy seeds, or sea salt, or experiment with different seasonings like garlic, onion, or even cheddar cheese.

Optional: Add unflavored protein powder, whey protein powder, or swap out some flour with coconut flour or almond flour for almond flour Greek yogurt bagels.

Step-by-Step Guide to Fluffy Bagels with Greek Yogurt

Follow these step-by-step photos and instructions for the easiest way to make these homemade bagels:

  1. Prepare the dough. In a large bowl, combine Greek yogurtflour, baking powder, salt and any optional dry ingredients like unflavored protein powder. Mix until the dough forms a ball. The dough will be sticky!
  2. Shape the bagels. This recipe makes one large bagel or you can divide it into a few smaller bagels. Lightly flour your hands and divide the dough into equal pieces. Roll each piece of dough into a rope, then form into the classic bagel shape by connecting the ends. I like to roll the dough into a ball, stick my finger in the middle and twirl it around my finger for a quick bagel shape. You may also omit this step, form the dough into a ball and pat it down a little to make rolls instead of bagels!
  3. Apply the egg wash. Place the bagels on a parchment-lined baking sheet. Use a small bowl to whisk the large egg or egg whites, then brush the tops of the bagels for a glossy finish.
  4. Add toppings. Sprinkle with sesame seedspoppy seeds, or any of your favorite toppings. For different flavors, try cinnamon and brown sugar, or even garlic and herb seasoning.
  5. Bake or air fry. Bake in the oven at 375°F for 20–25 minutes until the tops are golden brown, or use an air fryer basket for 12–15 minutes at 350°F for a quicker option.
  6. Cool and serve. You must let the bagels cool to room temperature for the bagel to completely dry out on the inside. If you slice the bagel and still find the dough to be wet, place back in the oven with open halves up and cook for another 5-7 minutes. Enjoy with cream cheesepeanut butter, or as part of a savory cottage cheese bowl.
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Recipe Variations for this High Protein Bagel Recipe

This high-protein bagel recipe is highly adaptable. Here are some variations to try:

  • Gluten-Free Bagels: Use gluten-free flour instead of regular flour to make these suitable for those with gluten sensitivities.
  • Coconut Flour Bagels: For a unique texture, swap a portion of the flour with coconut flour.
  • Extra Protein: Add a tablespoon of unflavored protein powder to the dough.
  • Different Flavors: Mix in chocolate chips for a sweet option, or use everything bagel seasoning for a savory twist.

Serving Suggestions

These high-protein bagels are incredibly versatile. Here are some ways to enjoy them:

  • Breakfast Sandwich: Add scrambled egg whites, cheddar cheese, and avocado.
  • Sweet Option: Spread peanut butter and top with banana slices for a healthy snack.
  • Savory Cottage Cheese Bowl Pairing: Serve with a bowl of savory cottage cheese and sea salt.
  • Classic Cream Cheese: Keep it simple with cream cheese and a sprinkle of poppy seeds.
  • Dinner Side: Pair with a warm bowl of soup or salad for a light meal.

Tips for the Best Protein Bagel Recipe

  • Use room temperature ingredients: Measure out the Greek yogurt ahead of time and let it come to room temperature. This helps the dough come together smoothly and ensures a better rise.
  • Avoid overmixing: Once the dry ingredients are incorporated, stop mixing to keep the bagel dough soft and tender.
  • Longer storage: Store leftover bagels in an airtight container for up to 3 days, or freeze for later. Just reheat in the oven or air fryer for a freshly baked taste.
  • Experiment next time: Add chocolate chips, swap in cottage cheese pizza crust dough, or try shaping into mini bagel bites for fun, bite-sized snacks.
  • Don’t skip the parchment paper: make sure to grease or use parchment paper to help prevent sticking during baking. 
  • Roll the bagel dough evenly into bagel shapes for consistent cooking.
  • For a golden brown finish, brush on the egg wash evenly.

Nutritional Information

These high-protein bagels have approximately 15 grams of protein per serving, depending on the flour and yogurt used. Pair with a high-protein spread like peanut butter or serve alongside an egg salad for an even bigger protein boost.

Here’s the nutritional breakdown for one bagel:

  • Calories: 200
  • Protein: 15 grams of protein
  • Carbs: 35 grams
  • Fat: 0-2 grams (depending on the type of Greek yogurt used)

FAQs About This High-Protein Bagel Recipe

How do you store homemade bagels?

You can keep these high-protein bagels at room temperature for 1-2 days in an airtight container. For longer storage, refrigerate them if you plan to eat them within the week, or freeze them in a freezer-safe bag for up to 3 months. Just make sure they’re completely cool before freezing to maintain their fluffy texture.

What’s the best way to reheat frozen bagels?

The easiest way is to slice the bagel in half and use your toaster. If it has a bagel setting, even better! Toast for 2-3 minutes until warm and golden brown. You can also reheat them in an air fryer for a few minutes at 300ºF.

Are high-protein bagels healthy?

It depends on what you’re looking for in a bagel! If you want something with fewer ingredients than store-bought bagels and a higher protein content to support your protein goals, this recipe is a fantastic option. Plus, it’s customizable with your favorite toppings!

What are the macros for these protein bagels?

These bagels have approximately 200 calories per serving, 0-2 grams of fat (depending on the Greek yogurt you use), about 35 grams of carbs, and 15 grams of protein. It’s a great high-protein version of the traditional bagel.

What toppings go well with these bagels?

There are so many ways to enjoy them! Try peanut butter and banana, smashed avocado with a sprinkle of sea salt, butter and jam, or cream cheese with poppy seeds. For extra protein, add egg whites or make a breakfast sandwich by swapping out the English muffin for these fluffy bagels. You could even try savory options like cheddar cheese or egg salad for a filling meal.

How do you make protein bagels in the air fryer?

To air fry these bagels, prepare the bagel dough as instructed. Preheat your air fryer to 350ºF. Place 2-3 bagels in the air fryer basket, ensuring they aren’t overcrowded. Cook for 15-20 minutes until the tops are golden brown and puffed up. It’s the perfect way to enjoy bagel cravings without turning on the oven!

High Protein Bagels Recipe

These bagels provide a higher protein content than most traditional bagels. This makes them a great choice for anyone aiming to boost their protein intake.

Whether it’s your first time trying homemade bagels or you’re looking for a healthier high-protein version of a traditional bagel, this recipe is guaranteed to become a staple. The soft, chewy texture, customizable toppings, and higher protein content make these better bagels for any occasion. Don’t forget to check the recipe card below for full details and more top tips!

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If you’ve tried this Easy 5 Ingredient High Protein Bagel Recipe,  or any other recipe on The MomNutritionist Blog, then don’t forget to rate the recipe and leave me a comment below! I would love to hear about your experience making it. And if you took some pictures of it, share it with me on Instagram so I can repost on my stories!

2 ingredient protein bagel

5 Ingredient Easy High Protein Bagels Recipe (with Greek Yogurt)

These 5-Ingredient High-Protein Bagels are the perfect quick and healthy alternative to store-bought bagels. Made with Greek yogurt, all-purpose flour (or self-rising flour), and baking powder, they’re soft, chewy, and packed with about 15 grams of protein per serving. Customize them with your favorite toppings like sesame seeds, poppy seeds, or everything bagel seasoning, and enjoy them fresh or frozen for easy meal prep.
Prep Time 5 minutes
Cook Time 25 minutes
Total Time 30 minutes
Course Breakfast
Cuisine American
Servings 1 serving
Calories 217 kcal

Ingredients
  

  • 1/2 cup all purpose flour (or bread flour)
  • 1/2 cup Greek yogurt (full fat or low fat)
  • 1 teaspoon baking powder
  • 1/4 teaspoon salt
  • Sesame seeds, everything bagel seasoning, or poppy seeds

Instructions
 

  • Preheat the oven to 375ºF. Line a baking sheet with parchment paper; set aside.
  • In a large bowl, add flour, Greek yogurt, baking powder and salt. Mix together until a dough forms. You might want to use your hands to make this easier. The dough will be sticky. If it is too sticky, sprinkle a little more flour as needed.
  • Roll the dough into a long rope, then shape it into a circle, pinching the ends together to form a bagel shape. Alternatively, form the dough into a ball, poke a hole in the center and twirl around your finger to form a bagel shape.
  • Place the bagel on a parchment-lined baking sheet. In a small bowl, whisk the egg to create the egg wash. Brush the bagel with the egg wash and sprinkle your favorite seasonings, such as sesame seeds, poppy seeds, or everything bagel seasoning.
  • Bake the bagel for 20-25 minutes, or until it is golden brown on top and cooked through. If needed, broil for 1-2 minutes at the end for extra browning.
  • Let the bagel cool for a few minutes before slicing. If the inside of the bagel is still wet or doughy, return it to the oven for 5-7 minutes.

Notes

Notes:
  • Use self-rising/self-raising flour: you can also use self-rising flour if this is something you have on hand. Replace the flour and baking powder with 1/2 cup self-rising flour. You’ll still need ¼ teaspoon of salt in addition to the flour. 
  • Seasonings: Feel free to get creative with different flavors! Try cinnamon and brown sugar for a sweet option or add shredded cheddar cheese for a savory variation.
  • Storage: Store bagel in an airtight container at room temperature for up to 2 days or in the fridge for up to 5 days. For longer storage, freeze for up to 3 months.
  • Reheating: Toast frozen bagel in a toaster with a bagel setting or bake at 300°F for 8-10 minutes.
Air Fryer Directions:
    • Preheat your air fryer to 300°F (150°C).
    • Place bagel in the air fryer basket.
    • Air fry for 15-20 minutes or until golden brown and puffed up.

Nutrition

Calories: 217kcalCarbohydrates: 35gProtein: 14gPotassium: 1mgFiber: 0.01gIron: 0.4mg
Keyword bagels, high protein
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